PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK38790.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family Trihelix
Protein Properties Length: 329aa    MW: 36680 Da    PI: 8.2309
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK38790.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix45.81.6e-1472158186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergfer...spkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W+++ +  Li+a  e+  +l+rg+lk+++W++v++ + ++ +++   s +qCk++++ ++k++k++k+   +   ++ s++++f++l+
  KFK38790.1  72 CWSEEATEILIDAWGERFMELKRGNLKQQHWKQVAEIVNSERINKsvkSDIQCKNRIDTVKKKFKQEKAKIVST--GENSKWVFFNKLQ 158
                 7*************************************7777665223788********************994..55559******97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.3E-2371159No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MDEDDETQSR PSPENSLSPD PPIGVTTTTA KSSASSPSPR DGLALMVSPP NRTRSGGRRR  60
SGGGGGGGRD DCWSEEATEI LIDAWGERFM ELKRGNLKQQ HWKQVAEIVN SERINKSVKS  120
DIQCKNRIDT VKKKFKQEKA KIVSTGENSK WVFFNKLQHL IGEATTTTTL SKKGLMVTPS  180
LQQKRQGGVK RSSGGASSAR WHFRKRVASE TESESEPDLS GDDDSLPPPL LLSPVVDKSG  240
GGNEIGEVVM AILGFAESYE KAESLKIKQM VEIEKERMKF AKELELQRME FFKNQLEMFR  300
NVQDDEDEDG ERRSKRSHHS VKDNGNVRD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15563GGRRRSGGG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006299620.12e-89hypothetical protein CARUB_v10015798mg, partial
SwissprotQ9SYG22e-79ASIL1_ARATH; Trihelix transcription factor ASIL1
TrEMBLA0A087H9I80.0A0A087H9I8_ARAAL; Uncharacterized protein
STRINGfgenesh2_kg.1__4489__AT1G54060.11e-77(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM89101637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54060.14e-696B-interacting protein 1-like 1